bluecellulab.stimulus.circuit_stimulus_definitions

Defines the expected data structures associated with the stimulus defined in simulation configs.

Run-time validates the data via Pydantic.

Classes

ClampMode(*values)	Current clamp or conductance (dynamic) clamp.
Hyperpolarizing(*args, **kwargs)
Linear(*args, **kwargs)
Noise(*args, **kwargs)
OrnsteinUhlenbeck(*args, **kwargs)
Pattern(*values)	Enum that defaults to SONATA values.
Pulse(*args, **kwargs)
RelativeLinear(*args, **kwargs)
RelativeOrnsteinUhlenbeck(*args, **kwargs)
RelativeShotNoise(*args, **kwargs)
SEClamp(*args, **kwargs)
ShotNoise(*args, **kwargs)
Sinusoidal(*args, **kwargs)
Stimulus(*args, **kwargs)
SubThreshold(*args, **kwargs)	Injects a current step at some percent below a cell's threshold.
SynapseReplay(*args, **kwargs)

class bluecellulab.stimulus.circuit_stimulus_definitions.ClampMode(*values)[source]

Current clamp or conductance (dynamic) clamp.

class bluecellulab.stimulus.circuit_stimulus_definitions.Pattern(*values)[source]

Enum that defaults to SONATA values.

Has blueconfig overload.

class bluecellulab.stimulus.circuit_stimulus_definitions.SubThreshold(*args, **kwargs)[source]

Injects a current step at some percent below a cell’s threshold.

Parameters:

• __dataclass_self__ (PydanticDataclass)

• args (Any)

• kwargs (Any)